Doctor Francesca Di Giallonardo

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Doctor Francesca Di Giallonardo

Postdoctoral Fellow

Mar 2014�� Ph.D. Microbiology & Immunology, University of Zurich, Switzerland

Mar 2008 �� Master of Science in Biology, Human Biology, University of Zurich, Zurich, Switzerland

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Medicine & Health

The Kirby Institute

I am a trained virologist and expert in molecular biology with major research interests in evolutionary biology, disease emergence and genomics. My work includes determining the evolutionary dynamics of different viral pathogens and revealing the association between aspects of viral phenotype and viral emergence. Currently, I am most interested in the evolutionary history of HIV-1 in Australia and what factors most characterise the transmission dynamics within specific geographic areas and individual risk populations

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I obtained my PhD from the University of Zurich in Switzerland. My thesis focused on the application of next-generation technologies (NGS) to investigate key aspects of HIV-1 diversity within infected patients. Upon completion of my PhD, I obtained the Early Postdoc Mobility Fellowship from the SNFS that enabled me to move to Australia and uptake a position as postdoctoral researcher under the supervision of Prof. Edward Holmes at the University of Sydney. There, I worked on a broad range of projects covering pathogen diversity, epidemiology and biological control of feral animals. I joined the Kirby Institute in January 2018 after receiving the Advanced Postdoc Mobility Fellowship from the Swiss National Science Foundation (SNFS).

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Google Scholar��

https://scholar.google.com/citations?user=Qyoni6oAAAAJ&hl=en&oi=ao

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Phone

+61 2 9385 0465

E-mail

fdigiallonardo@kirby.unsw.edu.au

Location

Level 5, Wallace Wurth Building UNSW SYDNEY NSW 2052

Journal articles | 2024

Horsburgh BA; Walker GJ; Kelleher A; Lloyd AR; Bull RA; Giallonardo FD, 2024, 'Next-Generation Sequencing Methods for Near-Real-Time Molecular Epidemiology of HIV and HCV', Reviews in Medical Virology, 34,

Journal articles | 2024

King JM; Giallonardo FD; Shaik A; McGregor S; Yeung JYK; Sivaruban T; Lee FJ; Cunningham P; Dwyer DE; Nigro SJ; Grulich AE; Kelleher AD, 2024, 'Low HIV drug resistance prevalence among recently diagnosed HIV-positive men who have sex with men in a setting of high PrEP use', Journal of the International AIDS Society, 27,

Journal articles | 2024

Obeng BM; Kelleher AD; Di Giallonardo F, 2024, 'Molecular epidemiology to aid virtual elimination of HIV transmission in Australia', Virus Research, 341,

Journal articles | 2024

Sudhakar A; Wilson D; Devi R; Balak DA; Singh J; Tuidraki K; Gaunavinaka L; Turuva W; Naivalu T; Lawley B; Tay JH; Di Giallonardo F; Duchene S; Geoghegan JL, 2024, 'Molecular epidemiology of the HIV-1 epidemic in Fiji', npj Viruses, 2,

Journal articles | 2023

Bowden-Reid E; Ledger S; Zhang Y; Di Giallonardo F; Aggarwal A; Stella AO; Akerman A; Milogiannakis V; Walker G; Rawlinson W; Turville S; Kelleher AD; Ahlenstiel C, 2023, 'Novel siRNA therapeutics demonstrate multi-variant efficacy against SARS-CoV-2', Antiviral Research, 217,

Journal articles | 2023

Sghaier S; Sailleau C; Marcacci M; Thabet S; Curini V; Ben Hassine T; Teodori L; Portanti O; Hammami S; Jurisic L; Spedicato M; Postic L; Gazani I; Ben Osman R; Zientara S; Bréard E; Calistri P; Richt JA; Holmes EC; Savini G; Di Giallonardo F; Lorusso A, 2023, 'Epizootic Haemorrhagic Disease Virus Serotype 8 in Tunisia, 2021', Viruses, 15,

Journal articles | 2022

Amato L; Candeloro L; Di Girolamo A; Savini L; Puglia I; Marcacci M; Caporale M; Mangone I; Cammà C; Conte A; Torzi G; Mancinelli A; Di Giallonardo F; Lorusso A; Migliorati G; Schael T; D'Alterio N; Calistri P, 2022, 'Epidemiological and genomic findings of the first documented Italian outbreak of SARS-CoV-2 Alpha variant of concern', Epidemics, 39, pp. 100578,

Journal articles | 2022

Curini V; Marcacci M; Abid S; Ouederni M; Elmoussi A; Charaa L; Achour W; Ouhichi R; Maazaoui L; Di Pasquale A; Elghord H; Gzara A; Ripani A; Di Giallonardo F; Cammà C; Lorusso A; Boubaker IBB, 2022, 'Full Genome Characterization of Respiratory Syncytial Virus Causing a Fatal Infection in an Immunocompromised Patient in Tunisia', Pathogens, 11,

Journal articles | 2022

Molini U; Curini V; Jacobs E; Tongo E; Berjaoui S; Hemberger MY; Puglia I; Jago M; Khaiseb S; Cattoli G; Dundon WG; Lorusso A; Di Giallonardo F, 2022, 'First influenza D virus full-genome sequence retrieved from livestock in Namibia, Africa', Acta Tropica, 232,

Journal articles | 2022

Spedicato M; Compagni ED; Caporale M; Teodori L; Leone A; Ancora M; Mangone I; Perletta F; Portanti O; Di Giallonardo F; Bonfini B; Savini G; Lorusso A, 2022, 'Reemergence of an atypical bluetongue virus strain in goats, Sardinia, Italy', Research in Veterinary Science, 151, pp. 36 - 41,

Journal articles | 2021

Amato L; Jurisic L; Puglia I; Di Lollo V; Curini V; Torzi G; Di Girolamo A; Mangone I; Mancinelli A; Decaro N; Calistri P; Di Giallonardo F; Lorusso A; D’Alterio N, 2021, 'Multiple detection and spread of novel strains of the SARS-CoV-2 B.1.177 (B.1.177.75) lineage that test negative by a commercially available nucleocapsid gene real-time RT-PCR', Emerging Microbes and Infections, 10, pp. 1148 - 1155,

Journal articles | 2021

Di Giallonardo F; Pinto AN; Keen P; Shaik A; Carrera A; Salem H; Selvey C; Nigro SJ; Fraser N; Price K; Holden J; Lee FJ; Dwyer DE; Bavinton BR; Geoghegan JL; Grulich AE; Kelleher AD; Guy R; Prestage G; Zablotska I; Holden J; Duck T; Cooper C; Holt M; de Wit J; Kaldor J; Wilson D; Brotherton A; Cooper DA; Crooks L; Whittaker B; Callander D; Madeddu D; Schmidt HM; Telfer B; Boyd M; McGill S; Patel P; Power C; Gordon T; Feeney L; Bath K; Mackie B, 2021, 'Subtype-specific differences in transmission cluster dynamics of HIV-1 B and CRF01_AE in New South Wales, Australia', Journal of the International AIDS Society, 24, pp. e25655,

Journal articles | 2021

Di Giallonardo F; Puglia I; Curini V; Cammà C; Mangone I; Calistri P; Cobbin JCA; Holmes EC; Lorusso A, 2021, 'Emergence and spread of sars-cov-2 lineages b.1.1.7 and p.1 in Italy', Viruses, 13,

Journal articles | 2021

Featherstone LA; Di Giallonardo F; Holmes EC; Vaughan TG; Duchêne S, 2021, 'Infectious disease phylodynamics with occurrence data', Methods in Ecology and Evolution, 12, pp. 1498 - 1507,

Journal articles | 2021

Geoghegan JL; Di Giallonardo F; Wille M; Ortiz-Baez AS; Costa VA; Ghaly T; Mifsud JCO; Turnbull OMH; Bellwood DR; Williamson JE; Holmes EC, 2021, 'Virome composition in marine fish revealed by meta-transcriptomics', Virus Evolution, 7,

Journal articles | 2021

Geoghegan JL; Giallonardo FD; Wille M; Ortiz-Baez AS; Costa VA; Ghaly T; Mifsud JCO; Turnbull OMH; Bellwood DR; Williamson JE; Holmes EC, 2021, 'Erratum: Virome composition in marine fish revealed by meta-transcriptomics (Virus Evolution (2021) 7:1 (veab005) DOI: 10.1093/ve/veab005)', Virus Evolution, 7,

Journal articles | 2021

Kok YL; Vongrad V; Chaudron SE; Shilaih M; Leemann C; Neumann K; Kusejko K; Di Giallonardo F; Kuster H; Braun DL; Kouyos RD; Günthard HF; Metzner KJ, 2021, 'HIV-1 integration sites in CD4⁺ T cells during primary, chronic, and late presentation of HIV-1 infection', JCI Insight, 6,

Journal articles | 2020

Adikari TN; Di Giallonardo F; Leung P; Grifoni A; Sette A; Weiskopf D; Bull RA; Luciani F, 2020, 'Conserved epitopes with high HLA-I population coverage are targets of CD8⁺ T cells associated with high IFN-γ responses against all dengue virus serotypes', Scientific Reports, 10,

Journal articles | 2020

Campbell SJ; Ashley W; Gil-Fernandez M; Newsome TM; Di Giallonardo F; Ortiz-Baez AS; Mahar JE; Towerton AL; Gillings M; Holmes EC; Carthey AJR; Geoghegan JL, 2020, 'Red fox viromes in urban and rural landscapes', Virus Evolution, 6,

Journal articles | 2020

Di Giallonardo F; Duchene S; Puglia I; Curini V; Profeta F; Cammà C; Marcacci M; Calistri P; Holmes EC; Lorusso A, 2020, 'Genomic epidemiology of the first wave of sars-cov-2 in Italy', Viruses, 12,

Journal articles | 2020

Di Giallonardo F; Pinto AN; Keen P; Shaik A; Carrera A; Salem H; Selvey C; Nigro SJ; Fraser N; Price K; Holden J; Lee FJ; Dwyer DE; Bavinton BR; Grulich AE; Kelleher AD, 2020, 'Increased hiv subtype diversity reflecting demographic changes in the hiv epidemic in new south wales, australia', Viruses, 12, pp. 1402,

Journal articles | 2019

Di Giallonardo F; Pinto AN; Keen P; Shaik A; Carrera A; Salem H; Telfer B; Cooper C; Price K; Selvey C; Holden J; Bachmann N; Lee FJ; Dwyer DE; Duchêne S; Holmes EC; Grulich AE; Kelleher AD; Prestage G; de Wit J, 2019, 'Limited sustained local transmission of HIV-1 CRF01_AE in New South Wales, Australia', Viruses, 11, pp. 482,

Journal articles | 2019

Kerr PJ; Eden JS; Di Giallonardo F; Peacock D; Liu J; Strive T; Read AF; Holmes EC, 2019, 'Punctuated evolution of myxoma virus: Rapid and disjunct evolution of a recent viral lineage in Australia', Journal of Virology, 93,

Journal articles | 2019

Koh C; Audsley MD; Di Giallonardo F; Kerton EJ; Young PR; Holmes EC; McGraw EA, 2019, 'Sustained Wolbachia-mediated blocking of dengue virus isolates following serial passage in Aedes aegypti cell culture', Virus Evolution, 5,

Journal articles | 2018

Di Giallonardo F; Audsley MD; Shi M; Young PR; McGraw EA; Holmes EC, 2018, 'Complete genome of Aedes aegypti anphevirus in the Aag2 mosquito cell line', Journal of General Virology, 99, pp. 832 - 836,

Journal articles | 2018

Di Giallonardo F; Geoghegan JL; Cousins K; Shi M; Williamson JE; Holmes EC, 2018, 'Hidden diversity and evolution of viruses in market fish', Virus Evolution, 4, pp. vey031 - vey031,

Journal articles | 2018

Di Giallonardo F; Kok J; Fernandez M; Carter I; Geoghegan JL; Dwyer DE; Holmes EC; Eden JS, 2018, 'Evolution of human respiratory syncytial virus (RSV) over multiple seasons in New South Wales, Australia', Viruses, 10,

Journal articles | 2018

Pinto A; Di Giallonardo F; Keen P; Cooper C; Telfer B; Cooper D; Grulich A; Kelleher A, 2018, 'A10 Using the molecular epidemiology of HIV transmission in New South Wales to inform public health response: Assessing the representativeness of linked phylogenetic data', Virus Evolution, 4,

Journal articles | 2018

Pinto AN; Hawke K; Castley A; Chibo D; Giallonardo FD; Cooper C; Sawleshwarkar S; Kelleher A; Dwyer DE, 2018, 'HIV-1 subtype diversity, transmitted drug resistance and phylogenetics in Australia', Future Virology, 13, pp. 575 - 584,

Journal articles | 2017

Giallonardo FD; Schlub TE; Shi M; Holmes EC, 2017, 'Dinucleotide composition in animal RNA viruses is shaped more by virus family than by host species', Journal of Virology, 91,

Journal articles | 2017

Wilson JAC; Prow NA; Schroder WA; Ellis JJ; Cumming HE; Gearing LJ; Poo YS; Taylor A; Hertzog PJ; Di Giallonardo F; Hueston L; Le Grand R; Tang B; Le TT; Gardner J; Mahalingam S; Roques P; Bird PI; Suhrbier A, 2017, 'RNA-Seq analysis of chikungunya virus infection and identification of granzyme A as a major promoter of arthritic inflammation', PLoS Pathogens, 13,

Journal articles | 2016

Dill JA; Camus AC; Leary JH; Di Giallonardo F; Holmes EC; Nga TFF, 2016, 'Distinct viral lineages from fish and amphibians reveal the complex evolutionary history of hepadnaviruses', Journal of Virology, 90, pp. 7920 - 7933,

Journal articles | 2016

Duchene S; Di Giallonardo F; Holmes EC, 2016, 'Substitution model adequacy and assessing the reliability of estimates of virus evolutionary rates and time scales', Molecular Biology and Evolution, 33, pp. 255 - 267,

Journal articles | 2016

Duchêne S; Duchêne DA; Di Giallonardo F; Eden JS; Geoghegan JL; Holt KE; Ho SYW; Holmes EC, 2016, 'Cross-validation to select Bayesian hierarchical models in phylogenetics', BMC Evolutionary Biology, 16,

Journal articles | 2016

Geoghegan JL; Senior AM; Giallonardo FD; Holmes EC, 2016, 'Virological factors that increase the transmissibility of emerging human viruses', Proceedings of the National Academy of Sciences of the United States of America, 113, pp. 4170 - 4175,

Journal articles | 2016

Kok YL; Vongrad V; Shilaih M; Di Giallonardo F; Kuster H; Kouyos R; Günthard HF; Metzner KJ, 2016, 'Monocyte-derived macrophages exhibit distinct and more restricted HIV-1 integration site repertoire than CD4 + T cells', Scientific Reports, 6,

Journal articles | 2016

Noguera-Julian M; Cozzi-Lepri A; Di Giallonardo F; Schuurman R; Däumer M; Aitken S; Ceccherini-Silberstein F; D'Arminio Monforte A; Geretti AM; Booth CL; Kaiser R; Michalik C; Jansen K; Masquelier B; Bellecave P; Kouyos RD; Castro E; Furrer H; Schultze A; Günthard HF; Brun-Vezinet F; Metzner KJ; Paredes R; Schuurman R; Günthard H; Reqaeui F; Kaiser R; Brockmeyer N, 2016, 'Contribution of APOBEC3G/F activity to the development of low-abundance drug-resistant human immunodeficiency virus type 1 variants', Clinical Microbiology and Infection, 22, pp. 191 - 200,

Journal articles | 2016

Seifert D; Di Giallonardo F; Töpfer A; Singer J; Schmutz S; Günthard HF; Beerenwinkel N; Metzner KJ, 2016, 'A Comprehensive Analysis of Primer IDs to Study Heterogeneous HIV-1 Populations', Journal of Molecular Biology, 428, pp. 238 - 250,

Journal articles | 2016

St. John EP; Simen BB; Turenchalk GS; Braverman MS; Abbate I; Aerssens J; Bouchez O; Gabriel C; Izopet J; Meixenberger K; Di Giallonardo F; Schlapbach R; Paredes R; Sakwa J; Schmitz-Agheguian GG; Thielen A; Victor M; Metzner KJ; Däumer MP; Danzer M; Stabentheiner S; Pröll J; Hofer K; Mostmans W; Thys K; Van Marck H; Izopet J; Dubois M; Nicot F; Milan D; Thiele B; Kuecherer C; Nitsche A; Radonic A; Dabrowski PW; Lengauer T; Capobianchi MR; Bruselles A; Giombini E; Rozera G; Bartolini B; Codoñer FM; Pou C; Günthard HF; Yang WL; Aquino C; Bruggmann R; Künzli-Gontarczyk M; Stephens D; Makgamathe M; Khan G; Gordon M; Moreno E, 2016, 'A follow-up of the multicenter collaborative study on HIV-1 drug resistance and tropism testing using 454 ultra deep pyrosequencing', PLoS ONE, 11,

Journal articles | 2016

di Giallonardo F; Geoghegan JL; Docherty DE; McLean RG; Zody MC; Qu J; Yang X; Birren BW; Malboeuf CM; Newman RM; Ip HS; Holmes EC, 2016, 'Fluid spatial dynamics of West Nile virus in the United States: Rapid spread in a permissive host environment', Journal of Virology, 90, pp. 862 - 872,

Journal articles | 2015

Cozzi-Lepri A; Noguera-Julian M; Di Giallonardo F; Schuurman R; Däumer M; Aitken S; Ceccherini-Silberstein F; Monforte ADA; Geretti AM; Booth CL; Kaiser R; Michalik C; Jansen K; Masquelier B; Bellecave P; Kouyos RD; Castro E; Furrer H; Schultze A; Günthard HF; Brun-Vezinet F; Paredes R; Metzner KJ; Brockmeyer N, 2015, 'Low-frequency drug-resistant HIV-1 and risk of virological failure to first-line NNRTI-based ART: A multicohort European case-control study using centralized ultrasensitive 454 pyrosequencing', Journal of Antimicrobial Chemotherapy, 70, pp. 930 - 940,

Journal articles | 2015

Di Giallonardo F; Holmes EC, 2015, 'Exploring Host–Pathogen Interactions through Biological Control', PLoS Pathogens, 11,

Journal articles | 2015

Di Giallonardo F; Holmes EC, 2015, 'Viral biocontrol: Grand experiments in disease emergence and evolution', Trends in Microbiology, 23, pp. 83 - 90,

Journal articles | 2015

Seifert D; Di Giallonardo F; Metzner KJ; Guenthard HF; Beerenwinkel N, 2015, 'A Framework for Inferring Fitness Landscapes of Patient-Derived Viruses Using Quasispecies Theory (vol 199, pg 191, 2014)', GENETICS, 199, pp. 1271 - 1271,

Journal articles | 2015

Seifert D; Giallonardo FD; Metzner KJ; Günthard HF; Beerenwinke N, 2015, 'A framework for inferring fitness landscapes of patient-derived viruses using quasispecies theory', Genetics, 199, pp. 191 - 203,

Journal articles | 2014

Di Giallonardo F; Töpfer A; Rey M; Prabhakaran S; Duport Y; Leemann C; Schmutz S; Campbell NK; Joos B; Lecca MR; Patrignani A; Däumer M; Beisel C; Rusert P; Trkola A; Günthard HF; Roth V; Beerenwinkel N; Metzner KJ, 2014, 'Full-length haplotype reconstruction to infer the structure of heterogeneous virus populations', Nucleic Acids Research, 42,

Journal articles | 2014

Simen BB; Braverman MS; Abbate I; Aerssens J; Bidet Y; Bouchez O; Gabriel C; Izopet J; Kessler HH; Stelzl E; Di Giallonardo F; Schlapbach R; Radonic A; Paredes R; Recordon-Pinson P; Sakwa J; St. John EP; Schmitz-Agheguian GG; Metzner KJ; Däumer MP; Danzer M; Hackl C; Pröll J; Niklas N; Bizon B; Van Eygen V; Vandenbroucke I; Van Marck H; Dubois M; Nicot F; Milan D; Masquelier B; Fleury H; Viala S; Däumer M; Marell R; Thiele B; Kuecherer C; Meixenberger K; Nitsche A; Dabrowski PW; Ihlenfeldt HG; Capobianchi MR; Bruselles A; Rozera G; Bartolini B; Stephens D; Makgamathe M; Pillay D; Gordon M; Green T; Codoñer FM; Pou C; Günthard HF; Künzli-Gontarczyk M; Bruggmann R; Qi W; Turenchalk G; Hanczaruk B, 2014, 'An international multicenter study on HIV-1 drug resistance testing by 454 ultra-deep pyrosequencing', Journal of Virological Methods, 204, pp. 31 - 37,

Journal articles | 2013

Di Giallonardo F; Zagordi O; Duport Y; Leemann C; Joos B; Künzli-Gontarczyk M; Bruggmann R; Beerenwinkel N; Günthard HF; Metzner KJ, 2013, 'Next-Generation Sequencing of HIV-1 RNA Genomes: Determination of Error Rates and Minimizing Artificial Recombination', PLoS ONE, 8,

Journal articles | 2012

Althaus CF; Vongrad V; Niederöst B; Joos B; Di Giallonardo F; Rieder P; Pavlovic J; Trkola A; Günthard HF; Metzner KJ; Fischer M, 2012, 'Tailored enrichment strategy detects low abundant small noncoding RNAs in HIV-1 infected cells', Retrovirology, 9,

Journal articles | 2012

Decker M; Adamska M; Cronin A; Di Giallonardo F; Burgener J; Marowsky A; Falck JR; Morisseau C; Hammock BD; Gruzdev A; Zeldin DC; Arand M, 2012, 'EH3 (ABHD9): The first member of a new epoxide hydrolase family with high activity for fatty acid epoxides', Journal of Lipid Research, 53, pp. 2038 - 2045,

Journal articles | 2011

Huelsmann PM; Hofmann AD; Knoepfel SA; Popp J; Rauch P; Di Giallonardo F; Danke C; Gueckel E; Schambach A; Wolff H; Metzner KJ; Berens C, 2011, 'A suicide gene approach using the human pro-apoptotic protein tBid inhibits HIV-1 replication', BMC Biotechnology, 11,

Journal articles | 2011

Knoepfel SA; Di Giallonardo F; Däumer M; Thielen A; Metzner KJ, 2011, 'In-depth analysis of G-to-A hypermutation rate in HIV-1 env DNA induced by endogenous APOBEC3 proteins using massively parallel sequencing', Journal of Virological Methods, 171, pp. 329 - 338,

Journal articles | 2011

Metzner KJ; Leemann C; Di Giallonardo F; Grube C; Scherrer AU; Braun D; Kuster H; Weber R; Guenthard HF, 2011, 'Reappearance of minority K103N HIV-1 variants after interruption of ART initiated during primary HIV-1 infection', PLoS ONE, 6,
Preprints | 2024

Jurisic L; Auerswald H; Marcacci M; Di Giallonardo F; Coetzee LM; Curini V; Averaimo D; Ortiz-Baez AS; Cammà C; Di Teodoro G; Richt JA; Holmes EC; Lorusso A, 2024, Insect-specific Alphamesonivirus-1 (Mesoniviridae) in lymph node and lung tissues from two horses with acute respiratory syndrome,

Preprints | 2022

Sghaier S; Sailleau C; Marcacci M; Thabet S; Curini V; Ben Hassine T; Teodori L; Portanti O; Hammami S; Jurisic L; Spedicato M; Postic L; Gazani I; Ben Osman R; Zientara S; Breard E; Calistri P; Richt JA; Holmes EC; Savini G; Di Giallonardo F; Lorusso A, 2022, Epizootic Haemorrhagic Disease Virus Serotype 8 in Tunisia, 2021,

Preprints | 2021

Di Giallonardo F; Puglia I; Curini V; Cammà C; Mangone I; Calistri P; Cobbin JCA; Holmes EC; Lorusso A, 2021, Emergence and spread of SARS-CoV-2 lineages B.1.1.7 and P.1 in Italy,

Preprints | 2020

Campbell SJ; Ashley W; Gil-Fernandez M; Newsome TM; Di Giallonardo F; Ortiz-Baez AS; Mahar JE; Towerton AL; Gillings M; Holmes EC; Carthey AJR; Geoghegan JL, 2020, Red fox viromes across an urban-rural gradient,

Preprints | 2020

Geoghegan JL; Di Giallonardo F; Wille M; Ortiz-Baez AS; Costa VA; Ghaly T; Mifsud JCO; Turnbull OMH; Bellwood DR; Williamson JE; Holmes EC, 2020, Virome composition in marine fish revealed by meta-transcriptomics,

Conference Abstracts | 2019

Adikari TN; Leung P; Grifoni A; Di Giallonardo F; Weiskopf D; Sette A; Bull RA; Luciani F, 2019, 'Pan serotypic, highly conserved CD8 epitopes for a potential T-cell based vaccine against dengue infection', in EUROPEAN JOURNAL OF IMMUNOLOGY, WILEY, PEOPLES R CHINA, Beijing, Vol. 49, pp. 1690 - 1690, presented at 17th International Congress of Immunology of the International-Union-of-Immunological-Societies (IUIS), PEOPLES R CHINA, Beijing, 19 October 2019 - 23 October 2019,

Preprints | 2019

Featherstone LA; Di Giallonardo F; Holmes EC; Vaughan TG; Duchêne S, 2019, Infectious disease phylodynamics with occurrence data,

Preprints | 2018

Di Giallonardo F; Kok J; Fernandez M; Carter I; Geoghegan JL; Dwyer DE; Holmes EC; Eden J-S, 2018, Evolution of Human Respiratory Syncytial Virus (RSV) over Multiple Seasons in New South Wales, Australia,

Preprints | 2018

Kerr PJ; Eden J-S; Di Giallonardo F; Peacock D; Liu J; Strive T; Read AF; Holmes EC, 2018, Punctuated evolution of myxoma virus: rapid and disjunct evolution of a recent viral lineage in Australia,

Conference Papers | 2013

Cozzi-Lepri A; Noguera-Julian M; Di Giallonardo F; Schuurman R; Daeumer M; Aitken S; Guenthard HF; Brun-Vezinet F; Metzner KJ; Paredes R, 2013, 'Low-frequency drug-resistant HIV-1 and risk of virological failure to first-line NNRTI-based ART: a multi-cohort European case-control study using centralized ultrasensitive 454 sequencing', in ANTIVIRAL THERAPY, INT MEDICAL PRESS LTD, CANADA, Toronto, pp. A41 - A41, presented at International Workshop on HIV and Hepatitis Virus Drug Resistance and Curative Strategies, CANADA, Toronto, 04 June 2013 - 08 June 2013,

Conference Papers | 2013

Topfer A; Di Giallonardo F; Metzner KJ; Gunthard HF; Beerenwinkel N, 2013, 'Probing of viral diversity by global haplotype prediction', in 2013 IEEE 3rd International Conference on Computational Advances in Bio and medical Sciences (ICCABS), IEEE, pp. 1 - 1, presented at 2013 IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences (ICCABS), 12 June 2013 - 14 June 2013,

Conference Papers | 2008

Adamska M; Bekteshi M; Cronin A; Decker M; di Giallonardo F; Arand M, 2008, 'Characterisation of a new human epoxide hydrolase capable of metabolizing epoxyeicosatrienoic acids', in FASEB JOURNAL, FEDERATION AMER SOC EXP BIOL,

Conference Papers | 2008

Adamska M; Cronin A; Decker M; Di Giallonardo F; Arand M, 2008, 'Identification and characterization of a new mammalian epoxide hydrolase', in NAUNYN-SCHMIEDEBERGS ARCHIVES OF PHARMACOLOGY, SPRINGER, GERMANY, Mainz, pp. 67 - 67, presented at 49th Annual Meeting of the German-Society-for-Experimental-and-Clinical-Pharmacology-and-Toxicology, GERMANY, Mainz, 11 March 2008 - 13 March 2008,

Conference Papers | 2008

Di Giallonardo F; Adamska M; Arand M, 2008, 'Identification of the amino acid residues responsible for the catalytic activity of the new human epoxide hydrolase', in NAUNYN-SCHMIEDEBERGS ARCHIVES OF PHARMACOLOGY, SPRINGER, GERMANY, Mainz, pp. 67 - 67, presented at 49th Annual Meeting of the German-Society-for-Experimental-and-Clinical-Pharmacology-and-Toxicology, GERMANY, Mainz, 11 March 2008 - 13 March 2008,

Preprints |

Wong AKH; Mathivanan V; Di Giallonardo F; Ahlenstiel C; Turville SG, A Molecular Basis for the Increased Transmission of Ebolavirus in Recent Outbreaks,

Current projects:

Evolutionary history of HIV-1 subtype B and CRF01_AE in New South Wales
Identification and characterisation of transmission cluster across time
Identification of demographic factors that most impact transmission

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